You've got more guts than me! I've lowered a FWD engine/Tranny to replace solenoids, I did the heads on my 5.3, valve stem seals on an OHC 4.6L. But I'll leave the tranny drop for a shop.
It doesn't help that I work slow though. When I did my heads, I probably spent two days cleaning the block for the new heads, a couple of hours running a thread cleaner down each bolt hole, then washing them brake clean followed by blowing them out with air.
That said, I've also got a bad tick on cold start up. I'm hoping it's just piston slap because it goes away almost completely once the temperature reaches about 70°F. I'll take a listen to the bell housing on mine just in case it is the flywheel. I hadn't really considered that possibility.