Just a update.
I replaced my lock cylinders with new ones from a local part store, $43 for two cylinders w/two keys. I had to take off the door panels, and loosen up the outer door handles. I wasn't sure how to remove the door module, so I just loosened the door module so I could get my arm in behind it. It took me 4 hours to do both sides (I have very large hands) but the only rod I had to take off was the one on the lock cylinders.
If anyone knows how to take the door modules off (I wasn't sure the best way to remove rods/and window arms) I'm sure it would be very useful info for the next guy that needs to do these kind of projects.