After more testing today, you're probably right. But the caliper swap and hose swap etc were an effort in routine maintenance and didn't cause this issue but somehow I got this issue but don't know when or why. I've just decided this issue needs fixing. The new MC did help because the pedal holds really good now with engine off but unfortunately didnt solve the running softness.So hydraulic system has been opened up since you "swapped calipers". You got air trapped in your ABS manifold. It will take a very long time of locking up the brakes to activate the ABS pump and then bleeding to get it all out, if ever. You need a bidrectional scan tool and perform an auto bleed which actuates the solenoids in the ABS manifold. Is your Brake light on in the cluster????