I've been trying to get a holistic answer on the differences between letting the brain-box shift vs. manual shifting (I'm a three-pedal kind of guy) and no one really has any details on what the big differences are. Is it that much more taxing on the transmission to thumb your own gear ratios?
But, more importantly, is there a way to speed up the manual shifts? Downshifts seem to happen when you hit the button, but upshifts take forever to respond.
If anything, I would think it's easier on the trans to manually shift, because you're going to hold whatever gear you want for however long you want rather than it shifting back and forth and hunting and locking/unlocking the converter constantly.
Only downside is, definitely get worse MPGs because you will likely be running higher RPM for the majority of the time compared to letting it do its own things.
Have been manually shifting mine nearly daily, and could probably count on my hands and toes the amount of times I drove it and didn't floor it at some point over the last 80,000 miles (I'm @ 180k) and it doesn't seem to care, but I also did a bit of a trans tune on mine so that could play a big part of it.