I have the TR55s and are gapped at .035. They were at .040 before the supercharger though. GM changed from .060 to .040, there was an advisory that went out with the change.
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I put the NGK TR55's in my 5.3. I double checked the gap but all were at .040. As far as pressing the gapping tool against the center electrode to open up a gap I wouldn't do that regardless of it's size. You can slide the outer electrode through the hole with the larger part of the tool turned away from the plug. You can then gently pry down on the tool therebye lifting the outer electrode away from the center one therebye opening the gap.
2mpg increase is HUGE from just pluggs and wires
were your old pluggs all ****** up? did you go with a bigger dia. wire?