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Another update from the dealer. They found the source of the electrical problems. The negative battery cable was severely corroded and loose. They said this would have easily caused damage to the alternator. They said they actually see this frequently. So that checks out. I asked if it could have fried the computer and they said no. So I pressed further. If the cable was bad, could that cause low voltage across all electrical systems. Yes. If all systems had low voltage at the same time, could they all report a fault to the computer at the same time. Yes. So it's feasible the computer was working fine, correctly reported errors with 4 different systems, and was then replaced unnecessarily. Most likely.
So the story is becoming clearer. It's frustrating I'm the one having to put this story together.
Now, pushing more I asked how this electrical problem could have caused the knocking, because it all happened at the exact same time, and went away at the exact same time. They say this couldn't happen. I don't believe that yet. They also said the other electrical issues weren't related, but we have a pretty good idea that they were.
@M3kanic solenoids are electrical components. I have not yet asked about the solenoids. How did you find your issue?
I thought you said "they've already gone and checked every possible cable and tightened"? NOW they find a severely corroded ground?
I'm betting the AFM system is damaged and possibly from the electrical issues (power shortages/losses). As you said- solenoids are electrical components. So, if that has been taken care of, you need to move on to having the AFM system repaired, or better yet, deleted. Aside from violating any warranty, you could probably have a speed shop delete the AFM and tune for less than what the dealer wants just to replace a dead lifter(s) and stock camshaft and keeping the rest of the problematic AFM system.
Different mechanic. First place said they did. I'm guessing they stopped when they found the loose alternator cable. When I brought it over to GM, I asked them to look at electrical again.
The more I read about the AFM issues on these engines, the more I'm thinking that may be the case. So you think I need repairs to the AFM system, lifter, and potentially the camshaft?