I picked it back up yesterday afternoon the more I drive it the more it feels like the rear end, it's not the brakes and I don't think anything is binding up it does it from a roll. I am going to run it by a rear end shop and see what they think or the shop that did my transmission.
I forgot to mention, when I had my front driveshaft in the Jeckyl and Hyde shop, they used too small of an inner clip to retain the U-Joint. I didn't discover this until I saw grease all over my oil filter. There was hardly any movement in the yoke, but under load I'm sure that's where some of my clunk came from, as well as the vibration.
I just swapped that joint for a sealed one last week awaiting the new front shaft...just something to check.
When you get on and off the gas, it's hard to tell where the culprit is in regards to what's causing the excess driveline lash, especially with AWD.
Definitely check the u joint clips and the transfer case chain slack.
Did you grease the new joints if they have fittings? Also a dab of grease on the slip yoke may cure some lash. Just throwing out ideas.
Good luck, keep us posted.